Most performance shops should have intake spacers, and if not Summit, Competition Products, Doug Herbert, and such all have them. As far as what rod to use all depends on your budget. You could use a factory rod, but your piston would weigh a ton (literally). A factory performance 427 piston would work with a 400 long rod (6.535 length), but if you are going to buy longer rods anyway I might get a 700 or 800 long rod and get a piston with a shorter compression height to minimize the strain on the wrist pin as well as the piston. Then again, that is just my stupid thought as we won't try to get into the theory of long rod versus short rod. Those are just some options for you. I am sure before too long some of the other guys will jump in here with some other info.
Paul
I forgot to ask, what stroke crank do you have? That will make a difference.